Published Work

Library

Publications

2025

Session Introduction: Precision Medicine: Integrating Large-Scale Data and Intermediate Phenotypes for Understanding Health and Treating Disease

Biocomputing 2026: Proceedings of the Pacific Symposium · 596-599 · 2025

DeepDiff-SHAP: Interpretable deep learning for subgroup-specific causal hypothesis generation using conditional SHAP

Biocomputing 2026: Proceedings of the Pacific Symposium · 722-737 · 2025

DeepDiff-SHAP: Interpretable deep learning for subgroup-specific causal inference using conditional SHAP

bioRxiv · 2025.08. 14.670190 · 2025

Epstein-Barr virus seropositivity, immune dysregulation, and mortality in pediatric sepsis

JAMA network open · 8 (8) · e2527487-e2527487 · 2025

2024

DeepEXPOKE: A Deep Learning Framework with Polygenic Risk Scores as Knockoffs for Deconvoluting Genetic and Non-Genetic Exposure Risks in Sepsis and Coronary Heart Disease

medRxiv · 2024.10. 15.24315572 · 2024

Mild hypoxia accelerates cerebral cavernous malformation disease through cx3cr1-cx3cl1 signaling

Arteriosclerosis, thrombosis, and vascular biology · 44 (6) · 1246-1264 · 2024

Unveiling the Gut Microbiome Network Fingerprint: A Deep Learning Approach to Predict Immunotherapy Response in Melanoma Patients

bioRxiv · 2024.10. 21.619471 · 2024

2023

Deep neural networks with knockoff features identify nonlinear causal relations and estimate effect sizes in complex biological systems

GigaScience · 12 · giad044 · 2023

Refining empiric subgroups of pediatric sepsis using machine-learning techniques on observational data

Frontiers in Pediatrics · 11 · 1035576 · 2023

2022

Biological Pathways Enriched For Genes Associated With Lesion Burden In Cerebral Cavernous Malformation

Stroke · 53 (Suppl_1) · A109-A109 · 2022

Genetic risk factors associated with SARS-CoV-2 susceptibility in multiethnic populations

· 2022

2020

Assessment of autism zebrafish mutant models using a high-throughput larval phenotyping platform

Frontiers in cell and developmental biology · 8 · 586296 · 2020

2014

Body Size Preference of Marine Animals in Relation to Extinction Selectivity

AGU Fall Meeting Abstracts · 2014 · ED41A-3412 · 2014

2013

Ostracod Body Size as a Variable of Biomass

AGU Fall Meeting Abstracts · 2013 · ED41A-0713 · 2013

Other

Body Size Preference of Animals in Relation to Extinction Selectivity